Vol. 59, No. 7, 2016 Cover Contents

Special Focus on Biomolecular Network Analysis and Application
RESEARCH PAPER Website SpringerLink Google Scholar Cited in SCI: 2

Integrating phenotypic features and tissue-specific information to prioritize disease genes
Deng, Yue; Gao, Lin; Guo, Xingli; Wang, Bingbo
Sci China Inf Sci, 2016, 59(7): 070101
Keywords: gene prioritization; tissue-specific network; phenotype; PPI network; disease network
Cite as: Deng Y, Gao L, Guo X L, et al. Integrating phenotypic features and tissue-specific information to prioritize disease genes. Sci China Inf Sci, 2016, 59(7): 070101, doi: 10.1007/s11432-016-5584-y

Special Focus on Biomolecular Network Analysis and Application
RESEARCH PAPER Website SpringerLink Google Scholar Cited in SCI: 6

Identifying disease modules and components of viral infections based on multi-layer networks
Li, Yuanyuan; Zou, Xiufen
Sci China Inf Sci, 2016, 59(7): 070102
Keywords: multi-dimensional data; multi-layer network; complex disease; virus infection; disease modules
Cite as: Li Y Y, Zou X F. Identifying disease modules and components of viral infections based on multi-layer networks. Sci China Inf Sci, 2016, 59(7): 070102, doi: 10.1007/s11432-016-5580-2

Special Focus on Biomolecular Network Analysis and Application
RESEARCH PAPER Website SpringerLink Google Scholar Cited in SCI: 14

Detecting protein complexes from DPINs by density based clustering with Pigeon-Inspired Optimization Algorithm
Lei, Xiujuan; Ding, Yulian; Wu, Fang-Xiang
Sci China Inf Sci, 2016, 59(7): 070103
Keywords: dynamic protein-protein interaction network; pigeon-inspired optimization; protein complex; density based clustering; gene expression
Cite as: Lei X J, Ding Y L, Wu F-X. Detecting protein complexes from DPINs by density based clustering with Pigeon-Inspired Optimization Algorithm. Sci China Inf Sci, 2016, 59(7): 070103, doi: 10.1007/s11432-016-5578-9

Special Focus on Biomolecular Network Analysis and Application
RESEARCH PAPER Website SpringerLink Google Scholar Cited in SCI: 2

Identification of the clustering structure in microbiome data by density clustering on the Manhattan distance
Jiang, Xingpeng; Hu, Xiaohua; He, Tingting
Sci China Inf Sci, 2016, 59(7): 070104
Keywords: microbiome; information distance; data visualization; density clustering; microbial community
Cite as: Jiang X P, Hu X H, He T T. Identification of the clustering structure in microbiome data by density clustering on the Manhattan distance. Sci China Inf Sci, 2016, 59(7): 070104, doi: 10.1007/s11432-016-5587-8

Special Focus on Biomolecular Network Analysis and Application
RESEARCH PAPER Website SpringerLink Google Scholar Cited in SCI: 4

Understanding tissue-specificity with human tissue-specific regulatory networks
Guo, Weili; Zhu, Lin; Deng, Suping; Zhao, Xingming; Huang, Deshuang
Sci China Inf Sci, 2016, 59(7): 070105
Keywords: tissue-specificity; gene regulatory network; transcription factor; tissue-specific regulation; disease gene
Cite as: Guo W L, Zhu L, Deng S P, et al. Understanding tissue-specificity with human tissue-specific regulatory networks. Sci China Inf Sci, 2016, 59(7): 070105, doi: 10.1007/s11432-016-5582-0

Special Focus on Biomolecular Network Analysis and Application
RESEARCH PAPER Website SpringerLink Google Scholar Cited in SCI: 8

Identifying essential proteins based on dynamic protein-protein interaction networks and RNA-Seq datasets
Shang, Xuequn; Wang, Yu; Chen, Bolin
Sci China Inf Sci, 2016, 59(7): 070106
Keywords: essential protein; dynamic protein network; RNA-Seq data; gene co-expression pattern; M2 measure
Cite as: Shang X Q, Wang Y, Chen B L. Identifying essential proteins based on dynamic protein-protein interaction networks and RNA-Seq datasets. Sci China Inf Sci, 2016, 59(7): 070106, doi: 10.1007/s11432-016-5583-z

Special Focus on Biomolecular Network Analysis and Application
RESEARCH PAPER Website SpringerLink Google Scholar Cited in SCI: 52

Pinning controllability of autonomous Boolean control networks
Chen, Hongwei; Liang, Jinling; Wang, Zidong
Sci China Inf Sci, 2016, 59(7): 070107
Keywords: autonomous Boolean network; semi-tensor product; controllability; pinning control scheme; network transition matrix
Cite as: Chen H W, Liang J L, Wang Z D. Pinning controllability of autonomous Boolean control networks. Sci China Inf Sci, 2016, 59(7): 070107, doi: 10.1007/s11432-016-5579-8

Special Focus on Biomolecular Network Analysis and Application
RESEARCH PAPER Website SpringerLink Google Scholar Cited in SCI: 1

GOAL: the comprehensive gene ontology analysis layer
Jeong, Jong Cheol; Li, George; Chen, Xue-Wen
Sci China Inf Sci, 2016, 59(7): 070108
Keywords: gene ontology; molecular function; functional similarity; network-based analysis; BSM score
Cite as: Jeong J C, Li G, Chen X-W. GOAL: the comprehensive gene ontology analysis layer. Sci China Inf Sci, 2016, 59(7): 070108, doi: 10.1007/s11432-016-5581-1